ENSGALG00000003701


Gallus gallus

Features
Gene ID: ENSGALG00000003701
  
Biological name :SGMS1
  
Synonyms : SGMS1 / sphingomyelin synthase 1
  
Possible biological names infered from orthology : Phosphatidylcholine:ceramide cholinephosphotransferase 1 / Q8VCQ6
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 9714901
Gene end: 9791882
  
Corresponding Affymetrix probe sets: Gga.17305.1.S1_s_at (Chicken Array)   Gga.2939.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040149
Ensembl peptide - ENSGALP00000005856
NCBI entrez gene - 378907     See in Manteia.
RefSeq - XM_015278674
RefSeq - XM_015278671
RefSeq - XM_015278672
RefSeq - XM_015278673
RefSeq - NM_204390
RefSeq - XM_015278668
RefSeq - XM_015278669
RefSeq - XM_015278670
RefSeq Peptide - NP_989721
swissprot - F1NRU9
swissprot - A0A1L1U0X3
Ensembl - ENSGALG00000003701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgms1ENSDARG00000029621Danio rerio
 zgc:91976ENSDARG00000057053Danio rerio
 SGMS1ENSG00000198964Homo sapiens
 Sgms1ENSMUSG00000040451Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGMS2 / sphingomyelin synthase 2 / Q8NHU3* / Q9D4B1* / Phosphatidylcholine:ceramide cholinephosphotransferase 2 *ENSGALG0000001053550
SAMD8 / sterile alpha motif domain containing 8 / Q96LT4* / Q9DA37*ENSGALG0000000500435


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0002950 ceramide phosphoethanolamine synthase activity IEA
 molecular_functionGO:0033188 sphingomyelin synthase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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