ENSGALG00000004509


Gallus gallus

Features
Gene ID: ENSGALG00000004509
  
Biological name :UBB
  
Synonyms : Gallus gallus ubiquitin B (UBB), mRNA. / P0CG62 / UBB
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 6584989
Gene end: 6587790
  
Corresponding Affymetrix probe sets: Gga.4421.1.S1_a_at (Chicken Array)   Gga.4421.2.S1_x_at (Chicken Array)   Gga.4421.3.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053353
Ensembl peptide - ENSGALP00000063889
Ensembl peptide - ENSGALP00000063130
Ensembl peptide - ENSGALP00000062271
Ensembl peptide - ENSGALP00000058821
Ensembl peptide - ENSGALP00000038735
Ensembl peptide - ENSGALP00000048414
NCBI entrez gene - 101747587     See in Manteia.
RefSeq - XM_004946664
RefSeq - NM_001353988
RefSeq Peptide - NP_001340917
swissprot - A0A1L1RJ93
swissprot - A0A1D5P6T4
swissprot - A0A1L1RYF6
swissprot - P0CG62
swissprot - A0A1L1RWB4
Ensembl - ENSGALG00000004509
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
UBC / Ubb* / P0CG49* / ubiquitin B*ENSGALG0000004127774


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR019954  Ubiquitin conserved site
 IPR019956  Ubiquitin
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair TAS
 biological_processGO:0019985 translesion synthesis TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
TRAF mediated activation of IRF
Negative Regulation of MDA5 signaling
TRAF6 mediated NF-kB activation
Fanconi Anemia Pathway in DNA repair
RAD18 and ubiquitinated PCNA-mediated recruitment of translesion polymerases
Nucleotide Excision Repair
NFkB and MAPK activation mediated by TRAF6
TRAF6 mediated induction of proinflammatory cytokines
TAK1 activates NFkB by phosphorylation and activation of IKKs complex
NFkB activation mediated by RIP1 complexed with activated TLR3
Activated TAK1 mediates p38 MAP kinase phosphorylation
Activated TAK1 mediates Jun kinases (JNK) phosphorylation and activation
NFkB and MAPK activation mediated by TRAF6 upon TLR7 or TLR21 stimulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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