ENSGALG00000004670


Gallus gallus

Features
Gene ID: ENSGALG00000004670
  
Biological name :ATRIP
  
Synonyms : ATR-interacting protein / ATRIP
  
Possible biological names infered from orthology : Q8BMG1 / Q8WXE1
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 3281636
Gene end: 3298041
  
Corresponding Affymetrix probe sets: GgaAffx.2896.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048269
Ensembl peptide - ENSGALP00000053699
Ensembl peptide - ENSGALP00000007430
NCBI entrez gene - 415949     See in Manteia.
RefSeq - XM_015293047
RefSeq - NM_001256151
RefSeq - XM_015293045
RefSeq - XM_015293046
RefSeq Peptide - NP_001243080
swissprot - A0A1D5PLI2
swissprot - F1NGS1
swissprot - A0A1D5P6E4
Ensembl - ENSGALG00000004670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atripENSDARG00000063076Danio rerio
 ATRIPENSG00000164053Homo sapiens
 AtripENSMUSG00000025646Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033349  ATR-interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000077 DNA damage checkpoint IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
Activation of ATR in response to replication stress
HDR through Single Strand Annealing (SSA)
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
Fanconi Anemia Pathway
G2/M DNA damage checkpoint


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr