ENSGALG00000006355


Gallus gallus

Features
Gene ID: ENSGALG00000006355
  
Biological name :SPTY2D1
  
Synonyms : E1BUG7 / Protein SPT2 homolog / SPTY2D1
  
Possible biological names infered from orthology : Q68D10 / Q68FG3 / SPT2 chromatin protein domain containing 1
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 12592897
Gene end: 12604861
  
Corresponding Affymetrix probe sets: Gga.18927.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010258
NCBI entrez gene - 423083     See in Manteia.
RefSeq - NM_001199594
RefSeq Peptide - NP_001186523
swissprot - A0A0R3P9C1
swissprot - E1BUG7
Ensembl - ENSGALG00000006355
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spty2d1ENSDARG00000033889Danio rerio
 Q68D10ENSG00000179119Homo sapiens
 Q68FG3ENSMUSG00000049516Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013256  Chromatin SPT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated ISS
 biological_processGO:0006360 transcription by RNA polymerase I IMP
 biological_processGO:0010847 regulation of chromatin assembly ISS
 biological_processGO:0043486 histone exchange ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0001042 RNA polymerase I core binding IDA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0042393 histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr