ENSGALG00000006539


Gallus gallus

Features
Gene ID: ENSGALG00000006539
  
Biological name :C9H21orf2
  
Synonyms : C9H21orf2 / uncharacterized protein LOC424866
  
Possible biological names infered from orthology : 1810043G02Rik / C21orf2 / chromosome 21 open reading frame 2 / O43822 / Q8C6G1
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 4383100
Gene end: 4389373
  
Corresponding Affymetrix probe sets: GgaAffx.12971.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010549
Ensembl peptide - ENSGALP00000051663
Ensembl peptide - ENSGALP00000049318
NCBI entrez gene - 424866     See in Manteia.
RefSeq - NM_001006544
RefSeq - XM_015276936
RefSeq - XM_015276937
RefSeq Peptide - NP_001006544
swissprot - A0A1D5PFU6
swissprot - A0A1D5P9B7
swissprot - F1NW25
Ensembl - ENSGALG00000006539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:cabz01080295.1ENSDARG00000099397Danio rerio
 O43822ENSG00000160226Homo sapiens
 Q8C6G1ENSMUSG00000020284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003603  U2A"/phosphoprotein 32 family A, C-terminal
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0042769 DNA damage response, detection of DNA damage IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0032391 photoreceptor connecting cilium IEA
 cellular_componentGO:0036064 ciliary basal body IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr