ENSGALG00000006960


Gallus gallus

Features
Gene ID: ENSGALG00000006960
  
Biological name :RNF185
  
Synonyms : E3 ubiquitin-protein ligase RNF185 / Q5ZIR9 / RNF185
  
Possible biological names infered from orthology : Q91YT2
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 9129212
Gene end: 9142784
  
Corresponding Affymetrix probe sets: Gga.4866.2.S1_at (Chicken Array)   Gga.4866.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011262
NCBI entrez gene - 416965     See in Manteia.
RefSeq - XM_015275329
RefSeq - NM_001007840
RefSeq - XM_015275327
RefSeq - XM_015275328
RefSeq Peptide - NP_001007841
swissprot - Q5ZIR9
Ensembl - ENSGALG00000006960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6PC78ENSDARG00000032997Danio rerio
 Q91YT2ENSMUSG00000020448Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0044390 ubiquitin-like protein conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr