ENSGALG00000007516


Gallus gallus

Features
Gene ID: ENSGALG00000007516
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC091959.3 / Q5SFM8 / Q9P2N5 / RBM27 / RNA binding motif protein 27 / RNA-binding protein 27
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 17911113
Gene end: 17931125
  
Corresponding Affymetrix probe sets: Gga.10258.1.S1_at (Chicken Array)   Gga.10258.1.S1_s_at (Chicken Array)   Gga.16887.1.S1_at (Chicken Array)   Gga.18808.1.S1_s_at (Chicken Array)   GgaAffx.4686.1.S1_at (Chicken Array)   GgaAffx.4686.1.S1_s_at (Chicken Array)   GgaAffx.4686.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012140
NCBI entrez gene - 416348     See in Manteia.
RefSeq - XM_004945045
RefSeq - XM_015294057
RefSeq - XM_015294058
swissprot - F1NM59
Ensembl - ENSGALG00000007516
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm27ENSDARG00000060521Danio rerio
 AC091959.3ENSG00000275740Homo sapiens
 RBM27ENSG00000091009Homo sapiens
 Rbm27ENSMUSG00000024491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBM26 / RNA binding motif protein 26 / Q5T8P6* / Q6NZN0* / RNA-binding protein 26 *ENSGALG0000001691049


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR002483  PWI domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr