ENSGALG00000008736


Gallus gallus

Features
Gene ID: ENSGALG00000008736
  
Biological name :PNPLA7
  
Synonyms : patatin-like phospholipase domain-containing protein 7 / PNPLA7
  
Possible biological names infered from orthology : A2AJ88 / patatin like phospholipase domain containing 7 / Q6ZV29
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 2080863
Gene end: 2196807
  
Corresponding Affymetrix probe sets: Gga.18525.1.S1_at (Chicken Array)   Gga.5922.1.S1_at (Chicken Array)   Gga.5922.2.S1_a_at (Chicken Array)   GgaAffx.22677.1.S1_at (Chicken Array)   GgaAffx.5499.1.S1_at (Chicken Array)   GgaAffx.5499.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039467
Ensembl peptide - ENSGALP00000060646
Ensembl peptide - ENSGALP00000051769
Ensembl peptide - ENSGALP00000043583
NCBI entrez gene - 427774     See in Manteia.
RefSeq - XM_015279530
RefSeq - NM_001130742
RefSeq - XM_015279527
RefSeq - XM_015279529
RefSeq Peptide - NP_001124214
swissprot - A0A1L1RPE3
swissprot - A0A1D6UPS6
swissprot - A0A1D5PG49
swissprot - A0A1D5NTC9
Ensembl - ENSGALG00000008736
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clic3ENSDARG00000062986Danio rerio
 pnpla7bENSDARG00000040002Danio rerio
 PNPLA7ENSG00000130653Homo sapiens
 A2AJ88ENSMUSG00000036833Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000595  Cyclic nucleotide-binding domain
 IPR002641  Patatin-like phospholipase domain
 IPR014710  RmlC-like jelly roll fold
 IPR016035  Acyl transferase/acyl hydrolase/lysophospholipase
 IPR018490  Cyclic nucleotide-binding-like
 IPR029221  Penicillin-binding protein Tp47 domain A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004622 lysophospholipase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr