ENSGALG00000009029


Gallus gallus

Features
Gene ID: ENSGALG00000009029
  
Biological name :TSPAN12
  
Synonyms : Q5ZIF5 / Tetraspanin-12 / TSPAN12
  
Possible biological names infered from orthology : O95859 / Q8BKT6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 23467910
Gene end: 23513135
  
Corresponding Affymetrix probe sets: Gga.17880.1.S1_at (Chicken Array)   GgaAffx.12932.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057294
Ensembl peptide - ENSGALP00000014674
NCBI entrez gene - 417763     See in Manteia.
RefSeq - XM_015281018
RefSeq - NM_001007849
RefSeq - XM_015281012
RefSeq Peptide - NP_001007850
swissprot - Q5ZIF5
swissprot - A0A1D5PWG2
Ensembl - ENSGALG00000009029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan12ENSDARG00000032389Danio rerio
 O95859ENSG00000106025Homo sapiens
 Q8BKT6ENSMUSG00000029669Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0045765 regulation of angiogenesis IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr