ENSGALG00000009153


Gallus gallus

Features
Gene ID: ENSGALG00000009153
  
Biological name :COPA
  
Synonyms : coatomer subunit alpha / COPA
  
Possible biological names infered from orthology : coatomer protein complex subunit alpha / Coatomer subunit alpha Xenin Proxenin / P53621 / Q8CIE6
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 1094514
Gene end: 1221737
  
Corresponding Affymetrix probe sets: Gga.7208.2.S1_a_at (Chicken Array)   GgaAffx.22818.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046417
Ensembl peptide - ENSGALP00000039965
NCBI entrez gene - 426906     See in Manteia.
RefSeq - XM_015298363
RefSeq - NM_001031405
RefSeq Peptide - NP_001026576
swissprot - A0A1D5P185
swissprot - H9L3L2
Ensembl - ENSGALG00000009153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 copaENSDARG00000004173Danio rerio
 COPAENSG00000122218Homo sapiens
 CopaENSMUSG00000026553Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WDR37 / WD repeat domain 37 / Q8CBE3* / Q9Y2I8*ENSGALG000000067498


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR006692  Coatomer, WD associated region
 IPR010714  Coatomer, alpha subunit, C-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016391  Coatomer alpha subunit
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IBA
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030157 pancreatic juice secretion IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030126 COPI vesicle coat IBA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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