ENSGALG00000009627


Gallus gallus

Features
Gene ID: ENSGALG00000009627
  
Biological name :GPATCH2
  
Synonyms : GPATCH2 / G-patch domain containing 2
  
Possible biological names infered from orthology : Mus musculus G patch domain containing 2 (Gpatch2), transcript variant 3, mRNA. / Q7TQC7 / Q9NW75
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 19767184
Gene end: 19870620
  
Corresponding Affymetrix probe sets: GgaAffx.6046.1.S1_at (Chicken Array)   GgaAffx.6046.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051080
Ensembl peptide - ENSGALP00000015663
NCBI entrez gene - 421355     See in Manteia.
RefSeq - XM_015283658
RefSeq - NM_001031046
RefSeq - XM_015283655
RefSeq - XM_015283656
RefSeq - XM_015283657
RefSeq - XM_015283654
RefSeq Peptide - NP_001026217
swissprot - Q5F3Y2
swissprot - A0A1D5PE79
Ensembl - ENSGALG00000009627
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-21k16.4ENSDARG00000101260Danio rerio
 Q9NW75ENSG00000092978Homo sapiens
 Q7TQC7ENSMUSG00000039210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPATCH2L / G-patch domain containing 2 like / Q6PE65* / Q9NWQ4* / G patch domain-containing protein 2-like *ENSGALG0000001035034


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR026291  G patch domain-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010923 negative regulation of phosphatase activity IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr