ENSGALG00000012222


Gallus gallus

Features
Gene ID: ENSGALG00000012222
  
Biological name :RAP1GDS1
  
Synonyms : RAP1GDS1 / rap1 GTPase-GDP dissociation stimulator 1
  
Possible biological names infered from orthology : Mus musculus RAP1, GTP-GDP dissociation stimulator 1 (Rap1gds1), transcript variant 4, mRNA. / P52306
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 60076754
Gene end: 60165897
  
Corresponding Affymetrix probe sets: GgaAffx.11951.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019931
Ensembl peptide - ENSGALP00000063502
Ensembl peptide - ENSGALP00000062336
Ensembl peptide - ENSGALP00000052314
Ensembl peptide - ENSGALP00000047908
NCBI entrez gene - 422701     See in Manteia.
RefSeq - NM_001031150
RefSeq Peptide - NP_001026321
swissprot - A0A1D5PHN4
swissprot - A0A1L1RXD3
swissprot - F1NIB1
swissprot - A0A1D5P5E0
swissprot - A0A1L1RU32
Ensembl - ENSGALG00000012222
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAP1GDS1ENSDARG00000073741Danio rerio
 P52306ENSG00000138698Homo sapiens
 Rap1gds1ENSMUSG00000028149Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000000239538


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007264 small GTPase mediated signal transduction IBA
 biological_processGO:0032471 negative regulation of endoplasmic reticulum calcium ion concentration IEA
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0051561 positive regulation of mitochondrial calcium ion concentration IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr