ENSGALG00000012688


Gallus gallus

Features
Gene ID: ENSGALG00000012688
  
Biological name :NHLRC1
  
Synonyms : NHLRC1 / NHL repeat containing E3 ubiquitin protein ligase 1
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase NHLRC1 / Q6VVB1 / Q8BR37
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 60584279
Gene end: 60585526
  
Corresponding Affymetrix probe sets: GgaAffx.20422.1.S1_at (Chicken Array)   GgaAffx.8034.1.A1_at (Chicken Array)   GgaAffx.8034.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020673
NCBI entrez gene - 428477     See in Manteia.
RefSeq - XM_426034
swissprot - F1P141
Ensembl - ENSGALG00000012688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NHLRC1ENSG00000187566Homo sapiens
 Nhlrc1ENSMUSG00000044231Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001258  NHL repeat
 IPR001841  Zinc finger, RING-type
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013017  NHL repeat, subgroup
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0031398 positive regulation of protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Glycogen synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr