ENSGALG00000013651


Gallus gallus

Features
Gene ID: ENSGALG00000013651
  
Biological name :RNF217
  
Synonyms : ring finger protein 217 / RNF217
  
Possible biological names infered from orthology : D3YYI7 / Probable E3 ubiquitin-protein ligase RNF217 / Q8TC41
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 60322228
Gene end: 60376631
  
Corresponding Affymetrix probe sets: Gga.11745.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022161
NCBI entrez gene - 426209     See in Manteia.
RefSeq - XM_015284439
RefSeq - XM_015284440
RefSeq - XM_015284441
swissprot - F1NVH5
Ensembl - ENSGALG00000013651
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf217ENSDARG00000060944Danio rerio
 Q8TC41ENSG00000146373Homo sapiens
 D3YYI7ENSMUSG00000063760Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002867  IBR domain
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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