ENSGALG00000026081


Gallus gallus

Features
Gene ID: ENSGALG00000026081
  
Biological name :RBM38
  
Synonyms : Q5ZJX4 / RBM38 / RNA-binding protein 38
  
Possible biological names infered from orthology : Q62176 / Q9H0Z9 / RNA binding motif protein 38
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 11824460
Gene end: 11838132
  
Corresponding Affymetrix probe sets: Gga.5690.1.S1_s_at (Chicken Array)   Gga.5690.2.S1_at (Chicken Array)   GgaAffx.12413.1.S1_at (Chicken Array)   GgaAffx.22306.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042182
NCBI entrez gene - 768866     See in Manteia.
RefSeq - NM_001305093
RefSeq Peptide - NP_001292022
swissprot - Q5ZJX4
swissprot - R4GJ78
Ensembl - ENSGALG00000026081
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm38ENSDARG00000058818Danio rerio
 RBM38ENSG00000132819Homo sapiens
 Rbm38ENSMUSG00000027510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBM24 / RNA binding motif protein 24 / D3Z4I3* / Q9BX46* / RNA-binding protein 24 *ENSGALG0000001271279


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010830 regulation of myotube differentiation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0043484 regulation of RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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