ENSGALG00000034177


Gallus gallus

Features
Gene ID: ENSGALG00000034177
  
Biological name :RPS27L
  
Synonyms : ribosomal protein S27 like / RPS27L
  
Possible biological names infered from orthology : Q6ZWY3 / Q71UM5
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 4082418
Gene end: 4086399
  
Corresponding Affymetrix probe sets: Gga.5571.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043505
Ensembl peptide - ENSGALP00000059072
NCBI entrez gene - 415372     See in Manteia.
RefSeq - NM_001277460
RefSeq Peptide - NP_001264389
swissprot - A0A1L1RJZ1
swissprot - A0A1D5NT52
Ensembl - ENSGALG00000034177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q71UM5ENSG00000185088Homo sapiens
 Q6ZWY3ENSMUSG00000036781Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RPS27 / ribosomal protein S27 / P42677* / Q6ZWU9* / Rps27rt* / 40S ribosomal protein S27 * / ribosomal protein S27, retrogene*ENSGALG0000003744195


Protein motifs (from Interpro)
Interpro ID Name
 IPR000592  Ribosomal protein S27e
 IPR011332  Zinc-binding ribosomal protein
 IPR023407  Ribosomal protein S27e, zinc-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
 biological_processGO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator IEA
 biological_processGO:0031571 mitotic G1 DNA damage checkpoint IEA
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA
 biological_processGO:0045727 positive regulation of translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0008494 translation activator activity IEA
 molecular_functionGO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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