ENSGALG00000038684


Gallus gallus

Features
Gene ID: ENSGALG00000038684
  
Biological name :EEFSEC
  
Synonyms : EEFSEC / eukaryotic elongation factor, selenocysteine-tRNA specific
  
Possible biological names infered from orthology : P57772 / Q9JHW4 / Selenocysteine-specific elongation factor
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 9395163
Gene end: 9514067
  
Corresponding Affymetrix probe sets: Gga.5185.1.S1_at (Chicken Array)   GgaAffx.3684.1.S1_at (Chicken Array)   GgaAffx.3684.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057624
NCBI entrez gene - 416021     See in Manteia.
RefSeq - XM_015293368
RefSeq - XM_015293369
swissprot - A0A1D5PXD0
Ensembl - ENSGALG00000038684
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eefsecENSDARG00000004696Danio rerio
 EEFSECENSG00000132394Homo sapiens
 EefsecENSMUSG00000033216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR005225  Small GTP-binding protein domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001514 selenocysteine incorporation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0035368 selenocysteine insertion sequence binding IEA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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