ENSGALG00000038747


Gallus gallus

Features
Gene ID: ENSGALG00000038747
  
Biological name :TM4SF1
  
Synonyms : TM4SF1 / transmembrane 4 L six family member 18
  
Possible biological names infered from orthology : Q96CE8 / TM4SF18
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 23943067
Gene end: 23990052
  
Corresponding Affymetrix probe sets: Gga.12103.1.S1_at (Chicken Array)   GgaAffx.23228.1.S1_at (Chicken Array)   GgaAffx.6597.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044251
Ensembl peptide - ENSGALP00000043611
Ensembl peptide - ENSGALP00000061840
Ensembl peptide - ENSGALP00000051867
Ensembl peptide - ENSGALP00000045347
NCBI entrez gene - 425046     See in Manteia.
NCBI entrez gene - 771841     See in Manteia.
RefSeq - NM_001277478
RefSeq - XM_001234068
RefSeq Peptide - NP_001264407
swissprot - A0A1D5NV78
swissprot - A0A1L1RSQ2
swissprot - A0A1D5NTF6
swissprot - A0A1D5PGE5
swissprot - A0A1D5NY90
Ensembl - ENSGALG00000038747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tm4sf18ENSDARG00000060668Danio rerio
 Q96CE8ENSG00000163762Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TM4SF4 / transmembrane 4 L six family member 4 / P48230* / transmembrane 4 superfamily member 4*ENSGALG0000001042723
TM4SF1aENSGALG0000002862920
TM4SF19 / Q96DZ7* / TM4SF19-TCTEX1D2* / transmembrane 4 L six family member 19* / TM4SF19-TCTEX1D2 readthrough (NMD candidate)*ENSGALG0000000637520


Protein motifs (from Interpro)
Interpro ID Name
 IPR008661  L6 membrane


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr