ENSGALG00000043193


Gallus gallus

Features
Gene ID: ENSGALG00000043193
  
Biological name :TAF2
  
Synonyms : TAF2 / TATA-box binding protein associated factor 2
  
Possible biological names infered from orthology : Q6P1X5
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 136722337
Gene end: 136778971
  
Corresponding Affymetrix probe sets: GgaAffx.10509.1.S1_at (Chicken Array)   GgaAffx.10509.2.S1_at (Chicken Array)   GgaAffx.10509.2.S1_s_at (Chicken Array)   GgaAffx.12938.1.S1_at (Chicken Array)   GgaAffx.12938.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044678
Ensembl peptide - ENSGALP00000057559
Ensembl peptide - ENSGALP00000050984
Ensembl peptide - ENSGALP00000050460
NCBI entrez gene - 428389     See in Manteia.
RefSeq - XM_015283072
RefSeq - XM_015283074
RefSeq - XM_015283073
RefSeq - NM_001305162
RefSeq Peptide - NP_001292091
swissprot - A0A1D5PX65
swissprot - A0A1D5NWD9
swissprot - A0A1D5PDY6
Ensembl - ENSGALG00000043193
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf2ENSDARG00000102307Danio rerio
 TAF2ENSG00000064313Homo sapiens
 Taf2ENSMUSG00000037343Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR014782  Peptidase M1, membrane alanine aminopeptidase, N-terminal
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000086 G2/M transition of mitotic cell cycle IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr