ENSMUSG00000000563


Mus musculus

Features
Gene ID: ENSMUSG00000000563
  
Biological name :Atp5f1
  
Synonyms : Atp5f1 / ATP synthase F(0) complex subunit B1, mitochondrial / Q9CQQ7
  
Possible biological names infered from orthology : ATP5PB / ATP synthase peripheral stalk-membrane subunit b / P24539
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F2.2
Gene start: 105942698
Gene end: 105960099
  
Corresponding Affymetrix probe sets: 10386005 (MoGene1.0st)   10500990 (MoGene1.0st)   1426742_at (Mouse Genome 430 2.0 Array)   1433562_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115496
Ensembl peptide - ENSMUSP00000143734
Ensembl peptide - ENSMUSP00000113022
NCBI entrez gene - 11950     See in Manteia.
MGI - MGI:1100495
RefSeq - NM_001304719
RefSeq - NM_009725
RefSeq Peptide - NP_001291648
RefSeq Peptide - NP_033855
swissprot - Q9CQQ7
swissprot - A0A0G2JGX3
swissprot - Q5I0W0
swissprot - D6RGL7
Ensembl - ENSMUSG00000000563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atp5pbENSDARG00000011553Danio rerio
 ATP5PBENSGALG00000001452Gallus gallus
 ATP5PBENSG00000116459Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008688  ATP synthase, F0 complex, subunit B/MI25
 IPR013837  ATP synthase, F0 complex, subunit B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005743 mitochondrial inner membrane IDA
 cellular_componentGO:0005753 mitochondrial proton-transporting ATP synthase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043209 myelin sheath IDA
 cellular_componentGO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0010851 decreased effector memory CD8-positive, alpha-beta T cell number "reduced number of CD8-positive, alpha beta memory T cells with the phenotype CCR7-negative, CD127-positive, CD45RO-positive, and CD25-negative" [CL:0000913, GO_REF:0000031, GOC:add, GOC:pam, PMID:20146720]
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Allelic Composition: Aspatm1b(EUCOMM)Wtsi/Aspatm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Aspatm1b(EUCOMM)Wtsi/Ieg

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Atp1a3tm1b(EUCOMM)Hmgu/Atp1a3+
Genetic Background: C57BL/6N-Atp1a3tm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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