ENSMUSG00000001383


Mus musculus

Features
Gene ID: ENSMUSG00000001383
  
Biological name :Zmat2
  
Synonyms : Q9CPW7 / zinc finger, matrin type 2 / Zmat2
  
Possible biological names infered from orthology : Q96NC0
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B2
Gene start: 36793923
Gene end: 36799660
  
Corresponding Affymetrix probe sets: 10455007 (MoGene1.0st)   1417536_at (Mouse Genome 430 2.0 Array)   1417537_at (Mouse Genome 430 2.0 Array)   1446079_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000001419
NCBI entrez gene - 66492     See in Manteia.
MGI - MGI:1913742
RefSeq - NM_025594
RefSeq Peptide - NP_079870
swissprot - Q9CPW7
Ensembl - ENSMUSG00000001383
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat2ENSDARG00000004956Danio rerio
 ZMAT2ENSGALG00000041746Gallus gallus
 ZMAT2ENSG00000146007Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr