ENSMUSG00000002320


Mus musculus

Features
Gene ID: ENSMUSG00000002320
  
Biological name :Tm9sf1
  
Synonyms : Q9DBU0 / Tm9sf1 / Transmembrane 9 superfamily member 1
  
Possible biological names infered from orthology : AL136295.1 / O15321
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: C3
Gene start: 55635965
Gene end: 55643806
  
Corresponding Affymetrix probe sets: 10420071 (MoGene1.0st)   1418198_a_at (Mouse Genome 430 2.0 Array)   1442908_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113143
Ensembl peptide - ENSMUSP00000123471
Ensembl peptide - ENSMUSP00000119435
Ensembl peptide - ENSMUSP00000118427
Ensembl peptide - ENSMUSP00000115403
Ensembl peptide - ENSMUSP00000113782
Ensembl peptide - ENSMUSP00000002391
Ensembl peptide - ENSMUSP00000112764
Ensembl peptide - ENSMUSP00000112893
NCBI entrez gene - 74140     See in Manteia.
MGI - MGI:1921390
RefSeq - XM_017316217
RefSeq - NM_028780
RefSeq - XM_006519616
RefSeq - XM_006519617
RefSeq - XM_011245209
RefSeq Peptide - NP_083056
swissprot - Q9DBU0
swissprot - D6RGM8
swissprot - D3YYW1
swissprot - D3YWH4
swissprot - D3Z6X7
swissprot - D3Z279
Ensembl - ENSMUSG00000002320
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tm9sf1ENSDARG00000022970Danio rerio
 AL136295.1ENSG00000254692Homo sapiens
 O15321ENSG00000100926Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9ET30 / Tm9sf3 / transmembrane 9 superfamily member 3 / Q9HD45*ENSMUSG0000002501633
Q8BH24 / Tm9sf4 / Transmembrane 9 superfamily member 4 / Q92544*ENSMUSG0000006804032
P58021 / Tm9sf2 / transmembrane 9 superfamily member 2 / Q99805*ENSMUSG0000002554430
Gm364ENSMUSG0000007958425
AC174678.2 / AL136295.4*ENSMUSG0000011523223


Protein motifs (from Interpro)
Interpro ID Name
 IPR004240  Nonaspanin (TM9SF)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr