ENSMUSG00000002808


Mus musculus

Features
Gene ID: ENSMUSG00000002808
  
Biological name :Epdr1
  
Synonyms : Epdr1 / Mammalian ependymin-related protein 1 / Q99M71
  
Possible biological names infered from orthology : ependymin related 1 / Q9UM22
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A2
Gene start: 19591706
Gene end: 19619927
  
Corresponding Affymetrix probe sets: 10407955 (MoGene1.0st)   1421815_at (Mouse Genome 430 2.0 Array)   1450380_at (Mouse Genome 430 2.0 Array)   1460074_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152111
Ensembl peptide - ENSMUSP00000152124
Ensembl peptide - ENSMUSP00000002885
NCBI entrez gene - 105298     See in Manteia.
MGI - MGI:2145369
RefSeq - NM_134065
RefSeq Peptide - NP_598826
swissprot - A0A1Y7VKS9
swissprot - Q99M71
Ensembl - ENSMUSG00000002808
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 epdr1ENSDARG00000045420Danio rerio
 EPDR1ENSGALG00000042063Gallus gallus
 EPDR1ENSG00000086289Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001299  Ependymin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005764 lysosome IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
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Allelic Composition: Epb41tm1b(KOMP)Mbp/Epb41+
Genetic Background: C57BL/6N-Epb41tm1b(KOMP)Mbp/J

 MP:0002764 short tibia " reduced length of the medial and larger bone of the lower leg" [J:12736, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Epb41tm1b(KOMP)Mbp/Epb41+
Genetic Background: C57BL/6N-Epb41tm1b(KOMP)Mbp/J

 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Epb41tm1b(KOMP)Mbp/Epb41+
Genetic Background: C57BL/6N-Epb41tm1b(KOMP)Mbp/J

 MP:0010025 decreased total body fat amount "less than the normal total amount of connective tissue composed of fat cells within the entire body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Epb41tm1b(KOMP)Mbp/Epb41+
Genetic Background: C57BL/6N-Epb41tm1b(KOMP)Mbp/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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