ENSMUSG00000002825


Mus musculus

Features
Gene ID: ENSMUSG00000002825
  
Biological name :Qtrt1
  
Synonyms : Q9JMA2 / Qtrt1 / Queuine tRNA-ribosyltransferase catalytic subunit 1
  
Possible biological names infered from orthology : Q9BXR0
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A3
Gene start: 21411837
Gene end: 21420274
  
Corresponding Affymetrix probe sets: 10583634 (MoGene1.0st)   1450630_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000002902
Ensembl peptide - ENSMUSP00000150786
Ensembl peptide - ENSMUSP00000149808
Ensembl peptide - ENSMUSP00000149752
Ensembl peptide - ENSMUSP00000149197
Ensembl peptide - ENSMUSP00000148877
NCBI entrez gene - 60507     See in Manteia.
MGI - MGI:1931441
RefSeq - XM_006510526
RefSeq - NM_021888
RefSeq - XM_006510524
RefSeq - XM_006510525
RefSeq Peptide - NP_068688
swissprot - A0A1L1SUI5
swissprot - A0A1L1SS96
swissprot - A0A1L1SS46
swissprot - A0A1L1SQU8
swissprot - A0A1L1SQ28
swissprot - Q9JMA2
Ensembl - ENSMUSG00000002825
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 qtrt1ENSDARG00000043105Danio rerio
 QTRT1ENSG00000213339Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Qtrt2 / queuine tRNA-ribosyltransferase accessory subunit 2 / Q9H974*ENSMUSG0000002270418


Protein motifs (from Interpro)
Interpro ID Name
 IPR002616  tRNA-guanine(15) transglycosylase-like
 IPR004803  tRNA-guanine transglycosylase
 IPR036511  Queuine tRNA-ribosyltransferase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0101030 tRNA-guanine transglycosylation IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008479 queuine tRNA-ribosyltransferase activity ISO
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016763 transferase activity, transferring pentosyl groups IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
Show

Allelic Composition: Krastm4Tyj/Kras+,Ptentm1Hwu/Ptentm1Hwu
Genetic Background: involves: 129S4/SvJae

Allelic Composition: Qtrt1Gt(S12-11A1)Sor/Qtrt1+
Genetic Background: involves: 129S4/SvJaeSor

 MP:0013724 decreased circulating tyrosine level "the amount of the amino acid histidine in the blood is less than expected" [MGI:csmith]
Show

Allelic Composition: Krastm4Tyj/Kras+,Ptentm1Hwu/Ptentm1Hwu
Genetic Background: involves: 129S4/SvJae

Allelic Composition: Qtrt1Gt(S12-11A1)Sor/Qtrt1+
Genetic Background: involves: 129S4/SvJaeSor

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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