ENSMUSG00000003038


Mus musculus

Features
Gene ID: ENSMUSG00000003038
  
Biological name :Hmgn2
  
Synonyms : Hmgn2 / Non-histone chromosomal protein HMG-17 / P09602
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D3
Gene start: 133964738
Gene end: 133968650
  
Corresponding Affymetrix probe sets: 10403108 (MoGene1.0st)   10517141 (MoGene1.0st)   10522784 (MoGene1.0st)   10579659 (MoGene1.0st)   10591773 (MoGene1.0st)   1433507_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101513
Ensembl peptide - ENSMUSP00000120795
Ensembl peptide - ENSMUSP00000114704
Ensembl peptide - ENSMUSP00000098040
Ensembl peptide - ENSMUSP00000099612
Ensembl peptide - ENSMUSP00000099613
NCBI entrez gene - 15331     See in Manteia.
MGI - MGI:96136
RefSeq - NM_016957
RefSeq Peptide - NP_058653
swissprot - P09602
swissprot - Q5BL14
swissprot - B7ZCQ3
swissprot - Q5XK38
swissprot - A3KGL9
swissprot - F6W687
Ensembl - ENSMUSG00000003038
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hmgn2ENSDARG00000099572Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P09602 / Gm10282 / predicted pseudogene 10282ENSMUSG00000070713100
Gm6594ENSMUSG0000007337194
Gm16494ENSMUSG0000009177591
Gm20379ENSMUSG0000010062280


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IMP
 biological_processGO:0040034 regulation of development, heterochronic IGI
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr