ENSMUSG00000003662


Mus musculus

Features
Gene ID: ENSMUSG00000003662
  
Biological name :Ciao1
  
Synonyms : Ciao1 / Probable cytosolic iron-sulfur protein assembly protein CIAO1 / Q99KN2
  
Possible biological names infered from orthology : cytosolic iron-sulfur assembly component 1 / O76071
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: F1
Gene start: 127240938
Gene end: 127247816
  
Corresponding Affymetrix probe sets: 10487371 (MoGene1.0st)   1450953_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000134189
Ensembl peptide - ENSMUSP00000134199
Ensembl peptide - ENSMUSP00000003759
Ensembl peptide - ENSMUSP00000134159
NCBI entrez gene - 26371     See in Manteia.
MGI - MGI:1346998
RefSeq - NM_025296
RefSeq Peptide - NP_079572
swissprot - Q99KN2
swissprot - G3UYN9
swissprot - G3UYR5
swissprot - G3UYS4
Ensembl - ENSMUSG00000003662
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ciao1ENSDARG00000059212Danio rerio
 CIAO1ENSG00000144021Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Wsb2 / O54929 / WD repeat and SOCS box-containing 2 / Q9NYS7*ENSMUSG0000002936424
Wsb1 / O54927 / WD repeat and SOCS box-containing 1 / Q9Y6I7*ENSMUSG0000001767722


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR028608  Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0016226 iron-sulfur cluster assembly ISO
 cellular_componentGO:0071817 MMXD complex IEA
 cellular_componentGO:0097361 CIA complex IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr