ENSMUSG00000015290


Mus musculus

Features
Gene ID: ENSMUSG00000015290
  
Biological name :Ubl4a
  
Synonyms : P21126 / Ubiquitin-like protein 4A / Ubl4a
  
Possible biological names infered from orthology : P11441 / ubiquitin like 4A
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A7.3
Gene start: 74365718
Gene end: 74373218
  
Corresponding Affymetrix probe sets: 10605319 (MoGene1.0st)   1424538_at (Mouse Genome 430 2.0 Array)   1424539_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000015434
Ensembl peptide - ENSMUSP00000120461
Ensembl peptide - ENSMUSP00000136070
NCBI entrez gene - 27643     See in Manteia.
NCBI entrez gene - 100169864     See in Manteia.
MGI - MGI:95049
RefSeq - NM_001278271
RefSeq - NM_001278272
RefSeq - NM_145405
RefSeq Peptide - NP_001265200
RefSeq Peptide - NP_001265201
RefSeq Peptide - NP_663380
swissprot - Q3UK94
swissprot - F8WHM4
swissprot - P21126
Ensembl - ENSMUSG00000015290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q7ZWB2ENSDARG00000007359Danio rerio
 UBL4AENSG00000102178Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ubl4b / Q9CQ84 / ubiquitin-like 4B / Q8N7F7*ENSMUSG0000005589142


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR019954  Ubiquitin conserved site
 IPR019956  Ubiquitin
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071816 tail-anchored membrane protein insertion into ER membrane ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0016020 membrane ISO
 cellular_componentGO:0071818 BAT3 complex ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0051087 chaperone binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Pnkptm1.1Pmc/Pnkptm1.1Pmc,Tg(CAG-cre/Esr1*)5Amc/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Ubl4atm1.2Arte/Ubl4atm1.2Arte
Genetic Background: involves: C57BL/6

 MP:0001575 cyanosis "a dark bluish or purple skin discoloration resulting from deficient oxygenation of the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60159]
Show

Allelic Composition: Pnkptm1.1Pmc/Pnkptm1.1Pmc,Tg(CAG-cre/Esr1*)5Amc/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Ubl4atm1.2Arte/Ubl4atm1.2Arte
Genetic Background: involves: C57BL/6

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Ccm2ltm1Mlkn/Ccm2ltm1Mlkn,Ccm2tm1Mlkn/Ccm2+,Heg1tm1Mlkn/Heg1tm2.1Mlkn,Tg(Tek-cre)1Ywa/0
Genetic Background: involves: 129 * C57BL/6 * SJL

Allelic Composition: Ubl4atm1Xya/Y
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Ubl4atm1.1Xya/Ubl4atm1.1Xya
Genetic Background: involves: 129 * C57BL/6 * FVB/N

Allelic Composition: Ubl4atm1.1Xya/Y
Genetic Background: involves: 129 * C57BL/6 * FVB/N

 MP:0005438 abnormal glycogen homeostasis "abnormal processing and or utilization of this readily converted carbohydrate reserve, found in most tissues of the body, especially liver and muscle" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Pnkptm1.1Pmc/Pnkptm1.1Pmc,Tg(CAG-cre/Esr1*)5Amc/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Ubl4atm1.2Arte/Ubl4atm1.2Arte
Genetic Background: involves: C57BL/6

 MP:0011088 partial neonatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Pnkptm1.1Pmc/Pnkptm1.1Pmc,Tg(CAG-cre/Esr1*)5Amc/0
Genetic Background: involves: 129S1/Sv * C57BL/6 * CBA

Allelic Composition: Ubl4atm1.2Arte/Ubl4atm1.2Arte
Genetic Background: involves: C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr