ENSMUSG00000017453


Mus musculus

Features
Gene ID: ENSMUSG00000017453
  
Biological name :Pipox
  
Synonyms : pipecolic acid oxidase / Pipox / Q9D826
  
Possible biological names infered from orthology : pipecolic acid and sarcosine oxidase / Q9P0Z9
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B5
Gene start: 77880615
Gene end: 77894096
  
Corresponding Affymetrix probe sets: 10388718 (MoGene1.0st)   1449374_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000017597
NCBI entrez gene - 19193     See in Manteia.
MGI - MGI:1197006
RefSeq - XM_011248807
RefSeq - NM_008952
RefSeq Peptide - NP_032978
swissprot - Q3UEJ8
swissprot - Q9D826
Ensembl - ENSMUSG00000017453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pipoxENSDARG00000055591Danio rerio
 PIPOXENSGALG00000026392Gallus gallus
 PIPOXENSG00000179761Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006076  FAD dependent oxidoreductase
 IPR006281  Sarcosine oxidase, monomeric
 IPR036188  FAD/NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033514 L-lysine catabolic process to acetyl-CoA via L-pipecolate ISS
 biological_processGO:0046653 tetrahydrofolate metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process ISO
 cellular_componentGO:0005777 peroxisome IDA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0008115 sarcosine oxidase activity ISO
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0050031 L-pipecolate oxidase activity ISO


Pathways (from Reactome)
Pathway description
Lysine catabolism
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

 MP:0002110 abnormal digit morphology "abnormal development of the digits resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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