ENSMUSG00000018068


Mus musculus

Features
Gene ID: ENSMUSG00000018068
  
Biological name :Ints2
  
Synonyms : Integrator complex subunit 2 / Ints2 / Q80UK8
  
Possible biological names infered from orthology : Q9H0H0
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: C
Gene start: 86210681
Gene end: 86257575
  
Corresponding Affymetrix probe sets: 10389421 (MoGene1.0st)   1429461_at (Mouse Genome 430 2.0 Array)   1436247_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135300
Ensembl peptide - ENSMUSP00000116633
Ensembl peptide - ENSMUSP00000119084
Ensembl peptide - ENSMUSP00000018212
Ensembl peptide - ENSMUSP00000103674
Ensembl peptide - ENSMUSP00000114859
NCBI entrez gene - 70422     See in Manteia.
MGI - MGI:1917672
RefSeq - XM_011249248
RefSeq - XM_006534177
RefSeq - XM_006534178
RefSeq - XM_006534179
RefSeq - XM_006534180
RefSeq - XM_006534181
RefSeq - XM_006534182
RefSeq - NM_027421
RefSeq - XM_006534176
RefSeq Peptide - NP_081697
swissprot - H3BK92
swissprot - A0A0A0MQG3
swissprot - Q5SXZ7
swissprot - Q80UK8
swissprot - X1WI16
Ensembl - ENSMUSG00000018068
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ints2ENSDARG00000069085Danio rerio
 INTS2ENSGALG00000005269Gallus gallus
 INTS2ENSG00000108506Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026236  Integrator complex subunit 2, metazoa
 IPR029321  Integrator complex subunit 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016180 snRNA processing IEA
 biological_processGO:0034472 snRNA 3"-end processing IBA
 cellular_componentGO:0005622 intracellular ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0032039 integrator complex IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Ift88tm1.1(KOMP)Vlcg/Ift88tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ift88tm1.1(KOMP)Vlcg/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr