ENSMUSG00000019837


Mus musculus

Features
Gene ID: ENSMUSG00000019837
  
Biological name :Gtf3c6
  
Synonyms : Gtf3c6 / Q9D8P7 / ral transcription factor 3C polypeptide 6
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 6 / Q969F1
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: B1
Gene start: 40247703
Gene end: 40258108
  
Corresponding Affymetrix probe sets: 10368739 (MoGene1.0st)   1420625_at (Mouse Genome 430 2.0 Array)   1420626_at (Mouse Genome 430 2.0 Array)   1434568_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148989
Ensembl peptide - ENSMUSP00000151091
Ensembl peptide - ENSMUSP00000150763
Ensembl peptide - ENSMUSP00000150276
Ensembl peptide - ENSMUSP00000019982
NCBI entrez gene - 67371     See in Manteia.
MGI - MGI:1914621
RefSeq - XM_006512829
RefSeq - NM_026113
RefSeq Peptide - NP_080389
swissprot - A0A1L1STD0
swissprot - A0A1L1SUI7
swissprot - Q9D8P7
swissprot - Q9DB36
swissprot - A0A1L1SQC4
Ensembl - ENSMUSG00000019837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c6ENSDARG00000043301Danio rerio
 GTF3C6ENSGALG00000015044Gallus gallus
 GTF3C6ENSG00000155115Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019481  Transcription factor TFIIIC, tau55-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated ISO
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003677 DNA binding ISO


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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