ENSMUSG00000019883


Mus musculus

Features
Gene ID: ENSMUSG00000019883
  
Biological name :Echdc1
  
Synonyms : Echdc1 / Ethylmalonyl-CoA decarboxylase / Q9D9V3
  
Possible biological names infered from orthology : ethylmalonyl-CoA decarboxylase 1 / Q9NTX5
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: A4
Gene start: 29313166
Gene end: 29347469
  
Corresponding Affymetrix probe sets: 10362379 (MoGene1.0st)   1419552_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020034
Ensembl peptide - ENSMUSP00000125048
Ensembl peptide - ENSMUSP00000125553
NCBI entrez gene - 52665     See in Manteia.
MGI - MGI:1277169
RefSeq - XM_006512797
RefSeq - NM_001110195
RefSeq - NM_025855
RefSeq Peptide - NP_001103665
RefSeq Peptide - NP_080131
swissprot - Q9D9V3
swissprot - E0CXS3
Ensembl - ENSMUSG00000019883
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ECHDC1ENSGALG00000014828Gallus gallus
 ECHDC1ENSG00000093144Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001753  Enoyl-CoA hydratase/isomerase
 IPR018376  Enoyl-CoA hydratase/isomerase, conserved site
 IPR029045  ClpP/crotonase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006635 fatty acid beta-oxidation IBA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004300 enoyl-CoA hydratase activity IBA
 molecular_functionGO:0004492 methylmalonyl-CoA decarboxylase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr