ENSMUSG00000020088


Mus musculus

Features
Gene ID: ENSMUSG00000020088
  
Biological name :Sar1a
  
Synonyms : Sar1a / secretion associated Ras related GTPase 1A
  
Possible biological names infered from orthology : Q9NR31
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: B4
Gene start: 61680299
Gene end: 61693297
  
Corresponding Affymetrix probe sets: 10363512 (MoGene1.0st)   10338812 (MoGene1.0st)   10339900 (MoGene1.0st)   10339963 (MoGene1.0st)   10341189 (MoGene1.0st)   10341474 (MoGene1.0st)   10341948 (MoGene1.0st)   10342051 (MoGene1.0st)   10342473 (MoGene1.0st)   10343273 (MoGene1.0st)   10344010 (MoGene1.0st)   10344380 (MoGene1.0st)   10338872 (MoGene1.0st)   10338996 (MoGene1.0st)   10339025 (MoGene1.0st)   10339210 (MoGene1.0st)   10339334 (MoGene1.0st)   10339677 (MoGene1.0st)   10340482 (MoGene1.0st)   10342501 (MoGene1.0st)   10342563 (MoGene1.0st)   10342726 (MoGene1.0st)   10342937 (MoGene1.0st)   10343867 (MoGene1.0st)   1415696_at (Mouse Genome 430 2.0 Array)   1423720_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000151444
Ensembl peptide - ENSMUSP00000151339
Ensembl peptide - ENSMUSP00000151885
Ensembl peptide - ENSMUSP00000151361
Ensembl peptide - ENSMUSP00000151383
Ensembl peptide - ENSMUSP00000020285
NCBI entrez gene - 20224     See in Manteia.
MGI - MGI:98230
RefSeq - XM_006513398
RefSeq - XM_011243389
RefSeq - XM_006513401
RefSeq - XM_006513399
RefSeq - NM_001358487
RefSeq - NM_001358488
RefSeq - NM_009120
RefSeq Peptide - NP_001345416
RefSeq Peptide - NP_001345417
RefSeq Peptide - NP_033146
swissprot - Q99JZ4
swissprot - A0A1W2P869
swissprot - A0A1W2P6N3
swissprot - A0A1W2P6R1
swissprot - A0A1W2P720
Ensembl - ENSMUSG00000020088
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sar1abENSDARG00000033320Danio rerio
 SAR1AENSGALG00000004431Gallus gallus
 SAR1AENSG00000079332Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sar1b / Q9CQC9 / secretion associated Ras related GTPase 1B / Q9Y6B6*ENSMUSG0000002038690


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006687  Small GTPase superfamily, SAR1-type
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0090110 cargo loading into COPII-coated vesicle IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0030127 COPII vesicle coat IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr