ENSMUSG00000020216


Mus musculus

Features
Gene ID: ENSMUSG00000020216
  
Biological name :Jsrp1
  
Synonyms : Jsrp1 / Junctional sarcoplasmic reticulum protein 1 / Q3MI48
  
Possible biological names infered from orthology : Q96MG2
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: C1
Gene start: 80808496
Gene end: 80813498
  
Corresponding Affymetrix probe sets: 10370991 (MoGene1.0st)   1432289_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020435
Ensembl peptide - ENSMUSP00000137666
Ensembl peptide - ENSMUSP00000137701
Ensembl peptide - ENSMUSP00000137960
NCBI entrez gene - 71912     See in Manteia.
MGI - MGI:1916700
RefSeq - XM_011243578
RefSeq - NM_028001
RefSeq - XM_006514169
RefSeq - XM_006514170
RefSeq Peptide - NP_082277
swissprot - Q3MI48
swissprot - M0QWR3
swissprot - M0QW84
swissprot - M0QW57
Ensembl - ENSMUSG00000020216
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JSRP1ENSG00000167476Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026178  Junctional sarcoplasmic reticulum protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IBA
 biological_processGO:0060314 regulation of ryanodine-sensitive calcium-release channel activity IMP
 biological_processGO:0072657 protein localization to membrane IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IDA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000747 muscle weakness "loss of muscle strength" [csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Nfkb1tm1Bal/Nfkb1tm1Bal
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002106 abnormal muscle physiology "anomolous function of the muscle, not due to an anatomical defect" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Nfkb1tm1Bal/Nfkb1tm1Bal
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0012106 impaired exercise endurance "impaired performance during controlled physical activity" [MGI:smb]
Show

Allelic Composition: Nfkb1tm1Bal/Nfkb1tm1Bal
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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