ENSMUSG00000020280


Mus musculus

Features
Gene ID: ENSMUSG00000020280
  
Biological name :Pus10
  
Synonyms : Pus10 / Putative tRNA pseudouridine synthase Pus10 / Q9D3U0
  
Possible biological names infered from orthology : pseudouridylate synthase 10 / Q3MIT2
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: A3.2
Gene start: 23665674
Gene end: 23732876
  
Corresponding Affymetrix probe sets: 10374706 (MoGene1.0st)   1452075_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020520
Ensembl peptide - ENSMUSP00000050395
Ensembl peptide - ENSMUSP00000105151
Ensembl peptide - ENSMUSP00000117934
NCBI entrez gene - 74467     See in Manteia.
MGI - MGI:1921717
RefSeq - XM_017314812
RefSeq - NM_001033654
RefSeq - NM_028304
RefSeq - NM_028956
RefSeq - XM_006514863
RefSeq - XM_006514864
RefSeq - XM_006514865
RefSeq - XM_006514866
RefSeq - XM_006514867
RefSeq - XM_006514861
RefSeq - XM_006514862
RefSeq Peptide - NP_001028826
RefSeq Peptide - NP_082580
RefSeq Peptide - NP_083232
swissprot - Q9D3U0
swissprot - B0QZU5
Ensembl - ENSMUSG00000020280
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pus10ENSDARG00000079973Danio rerio
 PUS10ENSGALG00000007835Gallus gallus
 PUS10ENSG00000162927Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr