ENSMUSG00000020549


Mus musculus

Features
Gene ID: ENSMUSG00000020549
  
Biological name :Elac2
  
Synonyms : Elac2 / Q80Y81 / Zinc phosphodiesterase ELAC protein 2
  
Possible biological names infered from orthology : elaC ribonuclease Z 2 / Q9BQ52
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B3
Gene start: 64979038
Gene end: 65002069
  
Corresponding Affymetrix probe sets: 10376959 (MoGene1.0st)   1419680_a_at (Mouse Genome 430 2.0 Array)   1428476_a_at (Mouse Genome 430 2.0 Array)   1428477_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117422
Ensembl peptide - ENSMUSP00000071788
Ensembl peptide - ENSMUSP00000098610
Ensembl peptide - ENSMUSP00000104337
NCBI entrez gene - 68626     See in Manteia.
MGI - MGI:1890496
RefSeq - XM_017314731
RefSeq - NM_023479
RefSeq - XM_006534065
RefSeq - XM_006534066
RefSeq - XM_006534067
RefSeq - XM_006534068
RefSeq Peptide - NP_075968
swissprot - B1ATP9
swissprot - B1ATP7
swissprot - Q3U0M8
swissprot - Q80Y81
Ensembl - ENSMUSG00000020549
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elac2ENSDARG00000034060Danio rerio
 ELAC2ENSGALG00000001036Gallus gallus
 ELAC2ENSG00000006744Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR027794  tRNase Z endonuclease
 IPR036866  Ribonuclease Z/Hydroxyacylglutathione hydrolase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0072684 mitochondrial tRNA 3"-trailer cleavage, endonucleolytic ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0042645 mitochondrial nucleoid IDA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004549 tRNA-specific ribonuclease activity ISO
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042781 3"-tRNA processing endoribonuclease activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Dbn1tm1b(KOMP)Wtsi/Dbn1+
Genetic Background: C57BL/6N-Dbn1tm1b(KOMP)Wtsi/Bay

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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