ENSMUSG00000020722


Mus musculus

Features
Gene ID: ENSMUSG00000020722
  
Biological name :Cacng1
  
Synonyms : Cacng1 / O70578 / Voltage-dependent calcium channel gamma-1 subunit
  
Possible biological names infered from orthology : calcium voltage-gated channel auxiliary subunit gamma 1 / Q06432
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: E1
Gene start: 107703218
Gene end: 107716522
  
Corresponding Affymetrix probe sets: 10392364 (MoGene1.0st)   1422813_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021065
NCBI entrez gene - 12299     See in Manteia.
MGI - MGI:1206582
RefSeq - NM_007582
RefSeq Peptide - NP_031608
swissprot - O70578
swissprot - Q4KL26
Ensembl - ENSMUSG00000020722
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacng1aENSDARG00000008772Danio rerio
 cacng1bENSDARG00000052360Danio rerio
 CACNG1ENSGALG00000027771Gallus gallus
 CACNG1ENSG00000108878Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cacng6 / Q8VHW3 / Voltage-dependent calcium channel gamma-6 subunit / Q9BXT2* / calcium voltage-gated channel auxiliary subunit gamma 6*ENSMUSG0000007881534


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR005421  Voltage-dependent calcium channel, gamma-1 subunit
 IPR008368  Voltage-dependent calcium channel, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0070296 sarcoplasmic reticulum calcium ion transport IMP
 biological_processGO:0070588 calcium ion transmembrane transport IMP
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IMP
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004145 abnormal muscle electrophysiology "anomaly in the function of the musculature as it relates to electrical phenomena" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Cacna1dtm1Jst/Cacna1dtm1Jst
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Cacng1tm1Rgg/Cacng1tm1Rgg
Genetic Background: involves: 129S7/SvEvBrd

Allelic Composition: Cacng1tm1Rgg/Cacng1+
Genetic Background: involves: 129S7/SvEvBrd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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