ENSMUSG00000021222


Mus musculus

Features
Gene ID: ENSMUSG00000021222
  
Biological name :Dcaf4
  
Synonyms : Dcaf4
  
Possible biological names infered from orthology : DCAF4L1 / DCAF4L2 / DDB1 and CUL4 associated factor 4 / DDB1 and CUL4 associated factor 4 like 1 / DDB1 and CUL4 associated factor 4 like 2 / Q3SXM0 / Q8NA75 / Q8WV16
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: D1
Gene start: 83520466
Gene end: 83541920
  
Corresponding Affymetrix probe sets: 10397054 (MoGene1.0st)   1424777_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152717
Ensembl peptide - ENSMUSP00000021645
Ensembl peptide - ENSMUSP00000152108
NCBI entrez gene - 73828     See in Manteia.
MGI - MGI:1921078
RefSeq - XM_006516284
RefSeq - NM_001165256
RefSeq - NM_030246
RefSeq - XM_006516282
RefSeq - XM_006516283
RefSeq Peptide - NP_084522
RefSeq Peptide - NP_001158728
swissprot - A0A1Y7VNZ0
swissprot - Q99LF7
swissprot - A0A1Y7VIR8
Ensembl - ENSMUSG00000021222
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr21ENSDARG00000003197Danio rerio
 wdr21ENSDARG00000110654Danio rerio
 ENSGALG00000009345Gallus gallus
 DCAF4ENSG00000119599Homo sapiens
 Q3SXM0ENSG00000182308Homo sapiens
 Q8NA75ENSG00000176566Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IBA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr