ENSMUSG00000021392


Mus musculus

Features
Gene ID: ENSMUSG00000021392
  
Biological name :Nol8
  
Synonyms : Nol8 / nucleolar protein 8 / Q3UHX0
  
Possible biological names infered from orthology : Q76FK4
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A5
Gene start: 49653078
Gene end: 49679016
  
Corresponding Affymetrix probe sets: 10405074 (MoGene1.0st)   1428950_s_at (Mouse Genome 430 2.0 Array)   1428951_at (Mouse Genome 430 2.0 Array)   1452974_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152324
Ensembl peptide - ENSMUSP00000152878
Ensembl peptide - ENSMUSP00000152552
Ensembl peptide - ENSMUSP00000152536
Ensembl peptide - ENSMUSP00000152517
Ensembl peptide - ENSMUSP00000021824
Ensembl peptide - ENSMUSP00000152186
NCBI entrez gene - 70930     See in Manteia.
MGI - MGI:1918180
RefSeq - XM_006516958
RefSeq - NM_001271397
RefSeq - XM_006516956
RefSeq - XM_006516957
RefSeq Peptide - NP_001258326
swissprot - E9QKD1
swissprot - Q3UHX0
swissprot - A0A1Y7VN09
swissprot - A0A1Y7VJP6
swissprot - A0A1Y7VNA8
Ensembl - ENSMUSG00000021392
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nol8ENSDARG00000044143Danio rerio
 NOL8ENSGALG00000004750Gallus gallus
 NOL8ENSG00000198000Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034138  Nucleolar protein 8, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:1902570 protein localization to nucleolus ISO
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001258 decreased body length "decreased crown to tail distance compared to controls" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
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Allelic Composition: Ltatm1.1(KOMP)Vlcg/Ltatm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ltatm1.1(KOMP)Vlcg/Ucd

 MP:0001488 increased startle reflex "reduced threshold or more severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [What s Wrong With My Mouse?:ISBN 0-471-31639-3, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Ltatm1.1(KOMP)Vlcg/Ltatm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ltatm1.1(KOMP)Vlcg/Ucd

 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Ltatm1.1(KOMP)Vlcg/Ltatm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ltatm1.1(KOMP)Vlcg/Ucd

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Nampttm1.1(KOMP)Vlcg/Nampttm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Nampttm1.1(KOMP)Vlcg/Ucd

 MP:0013279 increased fasted circulating glucose level "increase in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]
Show

Allelic Composition: Ltatm1.1(KOMP)Vlcg/Ltatm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Ltatm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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