ENSMUSG00000021643


Mus musculus

Features
Gene ID: ENSMUSG00000021643
  
Biological name :Serf1
  
Synonyms : O88892 / Serf1 / small EDRK-rich factor 1
  
Possible biological names infered from orthology : O75920 / SERF1A / SERF1B / small EDRK-rich factor 1A / small EDRK-rich factor 1B
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: D1
Gene start: 100108012
Gene end: 100114571
  
Corresponding Affymetrix probe sets: 10406877 (MoGene1.0st)   1434291_a_at (Mouse Genome 430 2.0 Array)   1449509_at (Mouse Genome 430 2.0 Array)   1454907_at (Mouse Genome 430 2.0 Array)   1454908_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119853
Ensembl peptide - ENSMUSP00000121609
Ensembl peptide - ENSMUSP00000121421
Ensembl peptide - ENSMUSP00000022145
Ensembl peptide - ENSMUSP00000119193
NCBI entrez gene - 20365     See in Manteia.
MGI - MGI:1337114
RefSeq - NM_011353
RefSeq Peptide - NP_035483
swissprot - B2KF73
swissprot - B2KF71
swissprot - O88892
Ensembl - ENSMUSG00000021643
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 serf2ENSDARG00000074340Danio rerio
 si:ch211-39k3.2ENSDARG00000075881Danio rerio
 O75920ENSG00000172058Homo sapiens
 O75920ENSG00000205572Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007513  Uncharacterised protein family SERF


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001556 increased circulating HDL cholesterol level "higher than average level of high density lipoprotein in the blood; this molecule transports cholesterol to the liver for excretion in bile" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:47439]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0002833 increased heart weight "greater than average weight of the heart compared to the average for a particular strain" [RGD:Rat Genome Database submission]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0005018 decreased T cell number "fewer than normal T cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0005178 increased total circulating cholesterol level "greater than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0008079 decreased CD8-positive T cell number "reduction in the number of the regulatory subset of T lymphocytes that are involved in MHC class I restricted interactions" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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