ENSMUSG00000022009


Mus musculus

Features
Gene ID: ENSMUSG00000022009
  
Biological name :Nufip1
  
Synonyms : Nuclear fragile X mental retardation-interacting protein 1 / Nufip1 / Q9QXX8
  
Possible biological names infered from orthology : NUFIP1, FMR1 interacting protein 1 / Q9UHK0
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: D3
Gene start: 76110891
Gene end: 76137379
  
Corresponding Affymetrix probe sets: 10416510 (MoGene1.0st)   1448802_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000022586
NCBI entrez gene - 27275     See in Manteia.
MGI - MGI:1351474
RefSeq - NM_013745
RefSeq - XM_006519072
RefSeq Peptide - NP_038773
swissprot - Q9QXX8
Ensembl - ENSMUSG00000022009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nufip1ENSDARG00000101024Danio rerio
 NUFIP1ENSGALG00000016972Gallus gallus
 NUFIP1ENSG00000083635Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR019496  Nuclear fragile X mental retardation-interacting protein 1, conserved domain
 IPR022755  Zinc finger, double-stranded RNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000492 box C/D snoRNP assembly IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0051259 protein complex oligomerization IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005726 perichromatin fibrils ISS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0008023 transcription elongation factor complex ISS
 cellular_componentGO:0016363 nuclear matrix ISS
 cellular_componentGO:0022626 cytosolic ribosome IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0048786 presynaptic active zone IEA
 cellular_componentGO:0070761 pre-snoRNP complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030515 snoRNA binding IEA
 molecular_functionGO:0030674 protein binding, bridging IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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