ENSMUSG00000022214


Mus musculus

Features
Gene ID: ENSMUSG00000022214
  
Biological name :Dcaf11
  
Synonyms : Dcaf11 / DDB1- and CUL4-associated factor 11 / Q91VU6
  
Possible biological names infered from orthology : AL136295.3 / Q8TEB1
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: C3
Gene start: 55560006
Gene end: 55570065
  
Corresponding Affymetrix probe sets: 10415262 (MoGene1.0st)   1448418_s_at (Mouse Genome 430 2.0 Array)   1460189_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113620
Ensembl peptide - ENSMUSP00000123453
Ensembl peptide - ENSMUSP00000121570
Ensembl peptide - ENSMUSP00000120296
Ensembl peptide - ENSMUSP00000119001
Ensembl peptide - ENSMUSP00000118762
Ensembl peptide - ENSMUSP00000118404
Ensembl peptide - ENSMUSP00000117617
Ensembl peptide - ENSMUSP00000114211
Ensembl peptide - ENSMUSP00000072344
Ensembl peptide - ENSMUSP00000113014
Ensembl peptide - ENSMUSP00000113202
NCBI entrez gene - 28199     See in Manteia.
MGI - MGI:90168
RefSeq - XM_006519083
RefSeq - XM_006519091
RefSeq - XM_006519090
RefSeq - XM_006519089
RefSeq - XM_006519088
RefSeq - XM_006519087
RefSeq - XM_006519086
RefSeq - NM_001199009
RefSeq - NM_133734
RefSeq - XM_006519092
RefSeq - XM_006519085
RefSeq - XM_006519081
RefSeq - XM_006519084
RefSeq Peptide - NP_598495
RefSeq Peptide - NP_001185938
swissprot - Q91VU6
swissprot - D6REI5
swissprot - D3YVR5
swissprot - D3YWI9
swissprot - D3YZ04
swissprot - D3YZ95
swissprot - D3Z2V1
swissprot - D3Z4U8
swissprot - D6RCG5
Ensembl - ENSMUSG00000022214
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dcaf11ENSDARG00000009868Danio rerio
 AL136295.3ENSG00000259371Homo sapiens
 DCAF11ENSG00000100897Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017399  WD repeat protein DCAF11/LEC14B
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Clrn1tm1.1(KOMP)Vlcg/Clrn1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Clrn1tm1.1(KOMP)Vlcg/Ucd

 MP:0004647 decreased lumbar vertebrae number "reduced number of the six bony segments of the spine located anterior to the sacral vertebrae and posterior to the thoracic vertebrae" [MESH:National Library of Medicine_Medical Subject Headings]
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Allelic Composition: Clrn1tm1.1(KOMP)Vlcg/Clrn1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Clrn1tm1.1(KOMP)Vlcg/Ucd

 MP:0010101 increased sacral vertebrae number "increase of any or all of the four bony segments of the spine located posterior to the lumbar vertebrae and anterior to the caudal vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Clrn1tm1.1(KOMP)Vlcg/Clrn1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Clrn1tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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