ENSMUSG00000022305


Mus musculus

Features
Gene ID: ENSMUSG00000022305
  
Biological name :Lrp12
  
Synonyms : Lrp12 / Mus musculus low density lipoprotein-related protein 12 (Lrp12), transcript variant 2, mRNA. / Q8BUJ9
  
Possible biological names infered from orthology : LDL receptor related protein 12 / Q9Y561
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: B3.1
Gene start: 39870589
Gene end: 39943994
  
Corresponding Affymetrix probe sets: 10428353 (MoGene1.0st)   1433864_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000022916
Ensembl peptide - ENSMUSP00000105934
Ensembl peptide - ENSMUSP00000154273
NCBI entrez gene - 239393     See in Manteia.
MGI - MGI:2443132
RefSeq - XM_006520904
RefSeq - NM_001347036
RefSeq - NM_172814
RefSeq - XM_006520902
RefSeq - XM_006520903
RefSeq Peptide - NP_001333965
RefSeq Peptide - NP_766402
swissprot - Q8BUJ9
Ensembl - ENSMUSG00000022305
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrp12ENSDARG00000098845Danio rerio
 LRP12ENSGALG00000033630Gallus gallus
 LRP12ENSG00000147650Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrp3 / LDL receptor related protein 3 / O75074*ENSMUSG0000000180240
Lrp10 / Q7TQH7 / Low-density lipoprotein receptor-related protein 10 / Q7Z4F1* / LDL receptor related protein 10*ENSMUSG0000002217532
A2AR95 / Ldlrad3 / low density lipoprotein receptor class A domain containing 3 / Q86YD5*ENSMUSG0000004805811


Protein motifs (from Interpro)
Interpro ID Name
 IPR000859  CUB domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR036055  LDL receptor-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration ISO
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0031175 neuron projection development ISO
 cellular_componentGO:0005887 integral component of plasma membrane ISO
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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