ENSMUSG00000022313


Mus musculus

Features
Gene ID: ENSMUSG00000022313
  
Biological name :Utp23
  
Synonyms : Q9CX11 / Utp23 / UTP23 small subunit processome component
  
Possible biological names infered from orthology : Q9BRU9
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: C
Gene start: 51877429
Gene end: 51884614
  
Corresponding Affymetrix probe sets: 10424077 (MoGene1.0st)   1429937_at (Mouse Genome 430 2.0 Array)   1435806_at (Mouse Genome 430 2.0 Array)   1447704_s_at (Mouse Genome 430 2.0 Array)   1455259_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119261
Ensembl peptide - ENSMUSP00000124157
Ensembl peptide - ENSMUSP00000124832
Ensembl peptide - ENSMUSP00000050603
NCBI entrez gene - 78581     See in Manteia.
MGI - MGI:1925831
RefSeq - NM_030132
RefSeq Peptide - NP_084408
swissprot - Q9CX11
swissprot - E0CYI7
swissprot - G3X989
swissprot - G3XA22
Ensembl - ENSMUSG00000022313
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp23ENSDARG00000105012Danio rerio
 UTP23ENSGALG00000032400Gallus gallus
 UTP23ENSG00000147679Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006984  rRNA-processing protein Fcf1/Utp23
 IPR029060  PIN-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000480 endonucleolytic cleavage in 5"-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IMP
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0032040 small-subunit processome IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA
 molecular_functionGO:0070181 small ribosomal subunit rRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr