ENSMUSG00000022889


Mus musculus

Features
Gene ID: ENSMUSG00000022889
  
Biological name :Mrpl39
  
Synonyms : 39S ribosomal protein L39, mitochondrial / Mrpl39 / Q9JKF7
  
Possible biological names infered from orthology : mitochondrial ribosomal protein L39 / Q9NYK5
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C3.3
Gene start: 84717576
Gene end: 84735742
  
Corresponding Affymetrix probe sets: 10440471 (MoGene1.0st)   1417966_at (Mouse Genome 430 2.0 Array)   1448909_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000112283
NCBI entrez gene - 27393     See in Manteia.
MGI - MGI:1351620
RefSeq - XM_017317025
RefSeq - NM_017404
RefSeq - XM_017317023
RefSeq - XM_017317024
RefSeq Peptide - NP_059100
swissprot - Q9JKF7
Ensembl - ENSMUSG00000022889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mrpl39ENSDARG00000041570Danio rerio
 MRPL39ENSGALG00000015742Gallus gallus
 MRPL39ENSG00000154719Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tars / Q9D0R2 / Threonine--tRNA ligase, cytoplasmic / P26639* / threonyl-tRNA synthetase*ENSMUSG0000002224123
Q8BLY2 / Tarsl2 / Probable threonine--tRNA ligase 2, cytoplasmic / A2RTX5* / threonyl-tRNA synthetase like 2*ENSMUSG0000003051523
Tars2 / Q3UQ84 / Threonine--tRNA ligase, mitochondrial / Q9BW92* / threonyl-tRNA synthetase 2, mitochondrial*ENSMUSG0000002810721


Protein motifs (from Interpro)
Interpro ID Name
 IPR012675  Beta-grasp domain superfamily
 IPR012676  TGS-like
 IPR018163  Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000002 mitochondrial genome maintenance TAS
 biological_processGO:0006412 translation ISA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome ISA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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