ENSMUSG00000024309


Mus musculus

Features
Gene ID: ENSMUSG00000024309
  
Biological name :Pfdn6
  
Synonyms : Pfdn6 / Prefoldin subunit 6 / Q03958
  
Possible biological names infered from orthology : O15212
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B1
Gene start: 33938821
Gene end: 33940343
  
Corresponding Affymetrix probe sets: 10450055 (MoGene1.0st)   10338306 (MoGene1.0st)   10338856 (MoGene1.0st)   10338947 (MoGene1.0st)   10339836 (MoGene1.0st)   10340904 (MoGene1.0st)   10341727 (MoGene1.0st)   10341962 (MoGene1.0st)   10342658 (MoGene1.0st)   10341199 (MoGene1.0st)   10343559 (MoGene1.0st)   1415744_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025163
Ensembl peptide - ENSMUSP00000133656
Ensembl peptide - ENSMUSP00000134069
Ensembl peptide - ENSMUSP00000137072
Ensembl peptide - ENSMUSP00000138662
NCBI entrez gene - 14976     See in Manteia.
MGI - MGI:95908
RefSeq - NM_010385
RefSeq - NM_001185182
RefSeq Peptide - NP_001172111
RefSeq Peptide - NP_034515
swissprot - Q792E4
swissprot - Q03958
swissprot - G3UYF9
Ensembl - ENSMUSG00000024309
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pfdn6ENSDARG00000037108Danio rerio
 PFDN6ENSG00000204220Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002777  Prefoldin beta-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IBA
 biological_processGO:0051131 chaperone-mediated protein complex assembly IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016272 prefoldin complex ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0051082 unfolded protein binding IEA
 molecular_functionGO:0051087 chaperone binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001523 impaired righting response "reduced ability or greater amount of time needed to recover from supine position" [J:25565]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Pdgfrbtm1b(EUCOMM)Hmgu/Pdgfrb+
Genetic Background: C57BL/6N-Pdgfrbtm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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