ENSMUSG00000024312


Mus musculus

Features
Gene ID: ENSMUSG00000024312
  
Biological name :Wdr46
  
Synonyms : Q9Z0H1 / Wdr46 / WD repeat domain 46
  
Possible biological names infered from orthology : O15213
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 33940660
Gene end: 33949695
  
Corresponding Affymetrix probe sets: 10444098 (MoGene1.0st)   1422709_a_at (Mouse Genome 430 2.0 Array)   1437828_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025170
NCBI entrez gene - 57315     See in Manteia.
MGI - MGI:1931871
RefSeq - NM_020603
RefSeq - XM_006524697
RefSeq Peptide - NP_065628
swissprot - Q9Z0H1
Ensembl - ENSMUSG00000024312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr46ENSDARG00000095879Danio rerio
 WDR46ENSG00000227057Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR012952  BING4, C-terminal domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:1903955 positive regulation of protein targeting to mitochondrion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0030686 90S preribosome IBA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr