ENSMUSG00000024487


Mus musculus

Features
Gene ID: ENSMUSG00000024487
  
Biological name :Yipf5
  
Synonyms : Q9EQQ2 / Yip1 domain family, member 5 / Yipf5
  
Possible biological names infered from orthology : Q969M3
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: B3
Gene start: 40204865
Gene end: 40219399
  
Corresponding Affymetrix probe sets: 10458583 (MoGene1.0st)   10568361 (MoGene1.0st)   1418576_at (Mouse Genome 430 2.0 Array)   1444289_at (Mouse Genome 430 2.0 Array)   1449142_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025364
NCBI entrez gene - 67180     See in Manteia.
MGI - MGI:1914430
RefSeq - NM_023311
RefSeq Peptide - NP_075800
swissprot - Q9EQQ2
Ensembl - ENSMUSG00000024487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yipf5ENSDARG00000007279Danio rerio
 YIPF5ENSGALG00000007404Gallus gallus
 YIPF5ENSG00000145817Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Yipf7 / Q9JIM5 / Yip1 domain family, member 7 / Q8N8F6*ENSMUSG0000002915862


Protein motifs (from Interpro)
Interpro ID Name
 IPR006977  Yip1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0060628 regulation of ER to Golgi vesicle-mediated transport IMP
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0070971 endoplasmic reticulum exit site IDA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002953 thick ventricular wall "increased depth of the cardiac wall of the heart ventricles" [ava:Anna V. Anagnostopoulos , Mouse Genome Informatics Curator]
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Allelic Composition: Nsd3tm1b(EUCOMM)Hmgu/Nsd3tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Nsd3tm1b(EUCOMM)Hmgu/H

 MP:0009141 increased prepulse inhibition "increase in the ability of a relatively mild stimulus to suppress the response to a strong, startle-eliciting stimulus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Nsd3tm1b(EUCOMM)Hmgu/Nsd3tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Nsd3tm1b(EUCOMM)Hmgu/H

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Nsd3tm1b(EUCOMM)Hmgu/Nsd3tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Nsd3tm1b(EUCOMM)Hmgu/H

 MP:0013293 embryonic lethality prior to tooth bud stage "death prior to the appearance of tooth buds (Mus: E12-E12.5)" [MGI:smb]
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Allelic Composition: Nsd3tm1b(EUCOMM)Hmgu/Nsd3tm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Nsd3tm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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