ENSMUSG00000024534


Mus musculus

Features
Gene ID: ENSMUSG00000024534
  
Biological name :Sncaip
  
Synonyms : Sncaip / synuclein, alpha interacting protein (synphilin)
  
Possible biological names infered from orthology : Q9Y6H5 / synuclein alpha interacting protein
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: D1
Gene start: 52767709
Gene end: 52915935
  
Corresponding Affymetrix probe sets: 10455721 (MoGene1.0st)   1423499_at (Mouse Genome 430 2.0 Array)   1430463_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137367
Ensembl peptide - ENSMUSP00000137282
Ensembl peptide - ENSMUSP00000137549
Ensembl peptide - ENSMUSP00000025413
Ensembl peptide - ENSMUSP00000111069
Ensembl peptide - ENSMUSP00000127189
Ensembl peptide - ENSMUSP00000136021
Ensembl peptide - ENSMUSP00000136200
Ensembl peptide - ENSMUSP00000136838
Ensembl peptide - ENSMUSP00000137107
Ensembl peptide - ENSMUSP00000137201
NCBI entrez gene - 67847     See in Manteia.
MGI - MGI:1915097
RefSeq - XM_017317971
RefSeq - NM_001199151
RefSeq - NM_001199153
RefSeq - NM_001199154
RefSeq - NM_026408
RefSeq - XM_006526191
RefSeq - XM_006526192
RefSeq Peptide - NP_001186082
RefSeq Peptide - NP_080684
RefSeq Peptide - NP_001186080
RefSeq Peptide - NP_001186083
swissprot - J3KMU0
swissprot - J3QNK1
swissprot - J3QP58
swissprot - J3QPG2
swissprot - E9Q4E2
swissprot - Q3V1N2
swissprot - A0A0G2JDC8
swissprot - G5E848
Ensembl - ENSMUSG00000024534
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sncaipENSDARG00000100198Danio rerio
 SNCAIPENSGALG00000005330Gallus gallus
 Q9Y6H5ENSG00000064692Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR032027  Synphilin-1, alpha-Synuclein-binding domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008219 cell death IEA
 biological_processGO:0042417 dopamine metabolic process IEA
 biological_processGO:0046928 regulation of neurotransmitter secretion IEA
 biological_processGO:0090083 regulation of inclusion body assembly IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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