ENSMUSG00000024844


Mus musculus

Features
Gene ID: ENSMUSG00000024844
  
Biological name :Banf1
  
Synonyms : Banf1 / Barrier-to-autointegration factor Barrier-to-autointegration factor, N-terminally processed / O54962
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 5364641
Gene end: 5366645
  
Corresponding Affymetrix probe sets: 10465005 (MoGene1.0st)   1421081_a_at (Mouse Genome 430 2.0 Array)   1421082_s_at (Mouse Genome 430 2.0 Array)   1421083_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025762
Ensembl peptide - ENSMUSP00000126202
NCBI entrez gene - 23825     See in Manteia.
MGI - MGI:1346330
RefSeq - NM_001286608
RefSeq - NM_001038231
RefSeq - NM_011793
RefSeq Peptide - NP_001033320
RefSeq Peptide - NP_001273537
RefSeq Peptide - NP_035923
swissprot - O54962
Ensembl - ENSMUSG00000024844
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 banf1ENSDARG00000037009Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Banf2 / Q8BVR0 / Barrier-to-autointegration factor-like protein / Q9H503* / barrier to autointegration factor 2*ENSMUSG0000003730743


Protein motifs (from Interpro)
Interpro ID Name
 IPR004122  Barrier- to-autointegration factor, BAF
 IPR036617  Barrier-to-autointegration factor, BAF superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015074 DNA integration IDA
 biological_processGO:0045071 negative regulation of viral genome replication ISO
 biological_processGO:0075713 establishment of integrated proviral latency TAS
 cellular_componentGO:0000793 condensed chromosome IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0008022 protein C-terminus binding ISO
 molecular_functionGO:0019899 enzyme binding ISO
 molecular_functionGO:0042802 identical protein binding ISO
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0047485 protein N-terminus binding ISO
 molecular_functionGO:0097726 LEM domain binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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