ENSMUSG00000025916


Mus musculus

Features
Gene ID: ENSMUSG00000025916
  
Biological name :Ppp1r42
  
Synonyms : Ppp1r42 / Protein phosphatase 1 regulatory subunit 42 / Q8R1Z4
  
Possible biological names infered from orthology : Q7Z4L9
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: A2
Gene start: 9968624
Gene end: 10009136
  
Corresponding Affymetrix probe sets: 10353038 (MoGene1.0st)   1424977_at (Mouse Genome 430 2.0 Array)   1430283_s_at (Mouse Genome 430 2.0 Array)   1432425_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115030
Ensembl peptide - ENSMUSP00000135276
Ensembl peptide - ENSMUSP00000135564
Ensembl peptide - ENSMUSP00000027049
Ensembl peptide - ENSMUSP00000115309
NCBI entrez gene - 69312     See in Manteia.
MGI - MGI:1921138
RefSeq - XM_006495567
RefSeq - NM_145692
RefSeq - XM_006495565
RefSeq - XM_006495566
RefSeq Peptide - NP_663730
swissprot - Q8R1Z4
swissprot - H3BKX2
swissprot - H3BK71
swissprot - E9PUJ7
Ensembl - ENSMUSG00000025916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6GQN5ENSDARG00000057632Danio rerio
 PPP1R42ENSGALG00000034424Gallus gallus
 Q7Z4L9ENSG00000178125Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010921 regulation of phosphatase activity IDA
 cellular_componentGO:0002177 manchette IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 molecular_functionGO:0003779 actin binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015631 tubulin binding IDA
 molecular_functionGO:0070840 dynein complex binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004609 vertebral fusion "the union of one or more vertebrae into a single structure" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Pik3c2atm1b(EUCOMM)Hmgu/Pik3c2a+
Genetic Background: C57BL/6N-Pik3c2atm1b(EUCOMM)Hmgu/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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